今天实现了一个简单的小程序来完成初级功能， 还有许多需要优化和修改的，留给明天完成（希望明天还能记得）， 还是先学学做网站吧。
#!/usr/bin/env python
# -*- coding: utf-8 -*-
'''
This is a file to transfer README file to tex syntax.
You could operate it through several options.
Copyright 2010, 陈同 (chentong_biology@163.com).
Please see the license file for legal information.
===========================================================
'''
__version__ = '0.1'
__revision__ = '0.1'
__author__ = 'chentong & ct586[9]'
__author_email__ = 'chentong_biology@163.com'
#=========================================================
#from __future__ import division, with_statement
import sys
def header(texname, projectName):
'''
header(texname)
this function is used to get a header file containing filename,
author, time and other information.
Then set the documentclass, the author information and the
projectName for the document.
'''
import time
now = time.localtime(time.time())
currentTime = time.strftime("%Y-%m-%d %H:%M:%S %a", now)
print '%% File: %s\n%% Created: %s\n%%Last Changed: \
%s\n%%' % (texname, currentTime, currentTime)
print r'''
\documentclass[a4paper, 12pt]{article}
%define the title
\author{\href{mailto:chentong\_biology@163.com}{chentong}}'''
print '\\title{ %s }\n\\date{\\today}\n' % projectName
def usingListings():
print r'''%this is used to display source code
\usepackage{listings}
\usepackage{xcolor}
%set parameter
\lstset{numbers=left, numberstyle=\tiny, keywordstyle=\color{blue!70},
commentstyle=\color{red!50!green!50!blue!50}, frame=shadowbox,
rulesepcolor=\color{red!20!green!20!blue!20}, escapeinside=``,
%chinese character should be in ``
xleftmargin=2em, xrightmargin=2em, aboveskip=1em}
%---------------------------------------listings----------------------
'''
#TODO we owe a titile here
def usingHyperlink():
print r'''%---------------hyperlink------------------------------
\usepackage[colorlinks, bookmarks=true, pdfstartview=FitH,
pdftitle=Protein repetition, pdfauthor=ct586]{hyperref}
%---------------hyperlink--------------------------------------------
'''
def usingModule():
usingListings()
usingHyperlink()
def usingNewCommand():
'''
This is the using of self constructed command.
'''
print r'''
%--------------self constructed command------------------------------
\newcommand{\ctfoldlink}[1]{\href{http://212.175.204.129/ftp/project1/%
#1}{#1}}
\newcommand{\descripfont}[1]{\small {#1}}
\newcommand{\fuzzyhref}[1]{\href{http://212.175.204.129/ftp/project1/%
result/fuzzymatch/qualityEvaluate/#1}{#1}}
\newcommand{\exacthref}[1]{\href{http://212.175.204.129/ftp/project1/%
result/exactmatch/qualityEvaluate/#1}{#1}}
\newcommand{\numcol}[1]{ {\color{blue}{#1}}}
\newcommand{\report}[1]{\subsection{#1}\label{#1}\verbatimtabinput%
[4]{document/#1}}
\newcommand{\findrepC}[1]{\subsection{#1}\label{#1}\lstinputlisting%
[language=C]{../../cbin/findRep/#1}}
%--------------self constructed command------------------------------
'''
def beginDoc():
'''
From this, we begin the document.
Using a directory to display the outline.
You can choose whether you want a new page fot the main content.
'''
print r'''
\begin{document}
\maketitle
\tableofcontents
\clearpage
'''
def parseDoc(inputfile):
'''
This is used to parse the input file to special format and add
a tex label for each of them to make it can be read by latex.
The file format it can discrimate is like the following.
Ignore ( and ), you may want to substitue the content in
them to your words.
The words after # is comment.
All the website should be put in a {}, not allowed to be splited
in two lines.
1.(Introduction)
(This belongs to the project phosphoBlast.)
#the folder name: what this folder is used for(for folder name,
better no use _, but whatever, now is ok)
(phosphoblast): (this is a working folder.)
#the file name: what this file is used for.(this can be a
subfolder, too)
(abandonedIn3.75): this is the abandoned locus in version3.75
which still in pepfile, total number is 48.
# a little limit, this second line is not allowed to use colon.
'''
import re
section = re.compile('[1-9]+\.(.+)')
secDesc = re.compile('\S')
list = re.compile('\t(\S+):\s*?(.*)')
listDesc = re.compile('\t(.+)')
nlist = re.compile('\t\t(\S+):\s*?(.*)')
nlistDesc = re.compile('\t\t(.+)')
nnlist = re.compile('\t\t\t(\S+):\s*?(.*)')
nnlistDesc = re.compile('\t\t\t(.+)')
specialChar = re.compile('([_])')
href = re.compile('({.+?})')
#flags
listFlag = 0
nlistFlag = 0
nnlistFlag = 0
for line in open(inputfile):
line = specialChar.sub(r'\\\1', line)
line = href.sub(r'\href\1{here}', line)
match = section.match(line)
if match:
if listFlag == 1:
listFlag = 0
print r'\end{enumerate}'
print
raw = r'\section{'
print '%s%s}' % (raw, match.group(1))
else:
match = secDesc.match(line)
if match:
print line,
else:
match = list.match(line)
if match:
if listFlag == 0:
listFlag = 1
print r'\begin{enumerate}'
if nlistFlag == 1:
nlistFlag = 0
print r' \end{itemize}'
raw1 = r' \item \ctfoldlink{'
print '%s%s}: %s' % (raw1, match.group(1), \
match.group(2))
else:
match = nlist.match(line)
if match:
if nlistFlag == 0:
nlistFlag = 1
print r' \begin{itemize}'
if nnlistFlag == 1:
nnlistFlag = 0
print r' \end{itemize}'
raw2 = r' \item '
print '%s%s: %s' % (raw2,match.group(1),\
match.group(2))
else:
match = nnlist.match(line)
if match:
if nnlistFlag == 0:
nnlistFlag == 1
print r' \begin{itemize}'
raw2 = r' \item '
print '%s%s: %s'%(raw2,match.group(1),\
match.group(2))
else:
sum = listFlag + nlistFlag + nnlistFlag
if sum == 1:
match = listDesc.match(line)
elif sum == 2:
match = nlistDesc.match(line)
elif sum == 3:
match = nnlistDesc.match(line)
if match:
space = ' ' * sum
print '%s%s' % (space, match.group(1))
if listFlag == 1:
print r'\end{enumerate}'
def endDoc():
print
print r'\end{document}'
def yieldTex(texname, projectName, inputfile):
'''
'''
header(texname, projectName)
usingModule()
usingNewCommand()
beginDoc()
parseDoc(inputfile)
endDoc()
def compileLatex(texname):
'''
This function is used to compile the created tex files.
'''
print 'Begin compiling'
import os
os.system("xelatex " + texname)
print 'End compiling'
def main():
if len(sys.argv) != 4:
print 'Using python %s texname projectName inputfile' \
% sys.argv[0]
sys.exit(0)
oldstdout = sys.stdout
fh = open(sys.argv[1], 'w')
sys.stdout = fh
yieldTex(sys.argv[1], sys.argv[2], sys.argv[3])
fh.close()
sys.stdout = oldstdout
print 'End'
while True:
print '''Please choose a command.
c-->compile, q-->quit.
If you add a new section, you may need to execute this more
than once.
'''
cmd = raw_input('>>>>')
if cmd == 'c':
compileLatex(sys.argv[1])
elif cmd == 'q':
break
if __name__ == '__main__':
main()